International Journal of Bioinformatics Research and Applications 2009

In silico analysis of motifs in promoters of differentially expressed genes in rice (Oryza sativa L.) under anoxia.

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Ashutosh Kumar

Shuchi Smita

Neeti Sahu

Vivekanand Sharma

Shankaracharya

Ambarish Vidyarthi

Dev Mani Pandey

ARTICLE: 19778868

DOI: 10.1504/IJBRA.2009.028681

BioSeek: 19778868

Keywords

Abstract

The aim of this study was to characterise the molecular mechanisms of transcriptional regulation of Differentially Expressed Genes (DEGs) in rice coleoptiles under anoxia by identifying motifs that are common in the promoter region of co-regulated genes. Un-changed DEGs (<2 fold and >-2), up-regulated DEGs (>or=2 fold) and down-regulated DEGs (

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In silico analysis of motifs in promoters of differentially expressed genes in rice (Oryza sativa L.) under anoxia.

Keywords

hypoxia

oryza

oryza sativa

Abstract

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